BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E07SP1|AL428564
(692 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1310 920 0.0
3x_Contig283 343 2e-94
>3x_Contig1310
Length = 7790
Score = 920 bits (453), Expect = 0.0
Identities = 502/535 (93%)
Strand = Plus / Plus
Query: 158 gatttgtaacatatcagcatcattgtcaatgatagadcttttacgaggcaatctctcagt 217
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gatttgtaacatatcagcatcattgtcaatgatagatcttttacgaggcaatctctcagt 60
Query: 218 atgttcttgcttcacatgtactggctcatggtacgatttatttgtcattggttttggrag 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 atgttcttgcttcacatgtactggctcatggtacgatttatttgtcattggttttggaag 120
Query: 278 aatcttctgttgcrttggracactgctgttgncacttgggactatggkatgtggrgattt 337
||||||||||||| |||| |||||||||||| ||||||| ||||||| |||||| |||||
Sbjct: 121 aatcttctgttgcattggaacactgctgttgacacttggtactatggtatgtggagattt 180
Query: 338 agaatttgattctkctggkacgatagggaactgacgtttcaattcctgtragtgacccac 397
||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 181 agaatttgattcttctggtacgatagggaactgacgtttcaattcctgtaagttacccac 240
Query: 398 tagatcggkragckccttcttragcktattgtgttccatcttaaggvtcttgakctcttt 457
|||||||| ||| ||||||| ||| |||||| ||||||||||||| |||||| ||||||
Sbjct: 241 tagatcggtaagctccttcttaagcttattgttttccatcttaaggatcttgatctcttt 300
Query: 458 cttcaaagcagttttgggacctggkttksvctttggctccacgggttgtgcngnttgnrt 517
||||||||||||||||| |||||| || ||||||||||||||||||||| | ||| |
Sbjct: 301 cttcaaagcagttttggaacctggttttttctttggctccacgggttgtgcagattgaat 360
Query: 518 atgakctaragtracatccagctgttccattttcacctgtggcttaacttttgcgctttc 577
|||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgatctaaagtaacatccagctgttccattttcacctgtggcttaacttttgcgctttc 420
Query: 578 cattttagctgatggctttaaggtcggaattggcatgacttgtttcttgcaagcagctgg 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cattttagctgatggctttaaggtcggaattggcatgacttgtttcttgcaagcagctgg 480
Query: 638 tgcaattttggcacggatgggcttaggctgggtatgagtgatcgawgttgtctgt 692
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 tgcaattttggcacggatgggcttaggctgggtatgagtgatcgatgttgtctgt 535
>3x_Contig283
Length = 1176
Score = 343 bits (169), Expect = 2e-94
Identities = 179/181 (98%), Gaps = 1/181 (0%)
Strand = Plus / Plus
Query: 1 gatcgtcttcatctgtcaaacttgcacgagaactcaaagaagaggtctgaaccatccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 gatcgtcttcatctgtcaaacttgcacgagaactcaaagaagaggtctgaaccatccttg 1056
Query: 61 aagaggaaagatttttgatgaagtctctatttggttcatcatcttcatcgaatttcaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 aagaggaaagatttttgatgaagtctctatttggttcatcatcttcatcgaatttcaaaa 1116
Query: 121 agatttcagtatcgtctgcaggttctggtttcacttcgatttgtaacatatcagcatcat 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1117 agatttcagtatcgtctgcaggttct-gtttcacttcgatttgtaacatatcatcatcat 1175
Query: 181 t 181
|
Sbjct: 1176 t 1176
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4518
Number of Sequences: 1807
Number of extensions: 4518
Number of successful extensions: 123
Number of sequences better than 1.0e-20: 2
length of query: 692
length of database: 10,358,551
effective HSP length: 16
effective length of query: 676
effective length of database: 10,329,639
effective search space: 6982835964
effective search space used: 6982835964
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)